Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Gm15744-201ENSMUST00000161734 213 ntBASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 AC115122.1-201ENSMUST00000224850 1040 ntBASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col16a1Q8BLX7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Gm15207-201ENSMUST00000119259 442 ntBASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Gm22442-201ENSMUST00000157256 144 ntBASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Gm9111-201ENSMUST00000219394 709 ntBASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 AC156501.1-201ENSMUST00000228219 270 ntBASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 n-R5s211-201ENSMUST00000093689 119 ntBASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col16a1Q8BLX7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Gm26013-201ENSMUST00000104404 119 ntBASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Gm14219-201ENSMUST00000120414 288 ntBASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Gm17877-201ENSMUST00000192578 814 ntBASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Mir483-201ENSMUST00000093631 73 ntBASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Gm6189-201ENSMUST00000164487 2082 ntBASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Gm43447-201ENSMUST00000198471 1535 ntBASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col16a1Q8BLX7 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm12419-201ENSMUST00000116649 636 ntBASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm11660-201ENSMUST00000120955 412 ntBASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm17889-201ENSMUST00000198410 598 ntBASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms