Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdhr3Q8BL00 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdhr3Q8BL00 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdhr3Q8BL00 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdhr3Q8BL00 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdhr3Q8BL00 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdhr3Q8BL00 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.91□□□□□ -0.66
Cdhr3Q8BL00 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdhr3Q8BL00 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Gm10146-201ENSMUST00000072739 309 ntBASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdhr3Q8BL00 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdhr3Q8BL00 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cdhr3Q8BL00 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.9□□□□□ -0.67
Cdhr3Q8BL00 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Cdhr3Q8BL00 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdhr3Q8BL00 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Cdhr3Q8BL00 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Gm12091-201ENSMUST00000146791 830 ntBASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Gm5866-201ENSMUST00000177881 973 ntBASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Gm42599-201ENSMUST00000201308 469 ntBASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms