Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp1Q8BJQ2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm14208-201ENSMUST00000119645 678 ntBASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm13813-201ENSMUST00000120998 787 ntBASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm14832-201ENSMUST00000121289 322 ntBASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm12566-201ENSMUST00000121479 359 ntBASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp1Q8BJQ2 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Gm11434-201ENSMUST00000122379 629 ntBASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Gm22902-201ENSMUST00000158488 302 ntBASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp1Q8BJQ2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 1098.2 ms