Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Gm10576-201ENSMUST00000191927 825 ntBASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Gm8099-201ENSMUST00000200510 742 ntBASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2bQ8BJF9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Gm6180-201ENSMUST00000065243 498 ntBASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Cog3-203ENSMUST00000227473 4197 ntBASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Chmp2bQ8BJF9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms