Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Atg4bQ8BGE6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atg4bQ8BGE6 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm13875-201ENSMUST00000120162 282 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm13342-201ENSMUST00000121055 207 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Mospd4-201ENSMUST00000180618 576 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm27243-201ENSMUST00000183964 521 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm42627-201ENSMUST00000197347 224 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atg4bQ8BGE6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4bQ8BGE6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4bQ8BGE6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4bQ8BGE6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.75□□□□□ -0.53
Atg4bQ8BGE6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4bQ8BGE6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atg4bQ8BGE6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms