Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc116Q80X53 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.25□□□□□ -0.45
Ccdc116Q80X53 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc116Q80X53 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc116Q80X53 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc116Q80X53 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc116Q80X53 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc116Q80X53 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc116Q80X53 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc116Q80X53 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm13315-201ENSMUST00000120376 991 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Rmrp-201ENSMUST00000157463 271 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm25927-201ENSMUST00000175058 117 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm3890-201ENSMUST00000182416 207 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 BC043934-202ENSMUST00000185694 2356 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Snora73a-201ENSMUST00000082453 205 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc116Q80X53 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Gm12502-201ENSMUST00000120197 444 ntBASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Gm8738-201ENSMUST00000172606 329 ntBASIC12.23□□□□□ -0.45
Ccdc116Q80X53 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms