Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.93□□□□□ -0.34
Trim62Q80V85 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.93□□□□□ -0.34
Trim62Q80V85 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Olfr582-201ENSMUST00000098212 960 ntBASIC12.93□□□□□ -0.34
Trim62Q80V85 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.93□□□□□ -0.34
Trim62Q80V85 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm9083-201ENSMUST00000120423 819 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm20482-202ENSMUST00000174729 825 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm3096-201ENSMUST00000185770 364 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm7783-201ENSMUST00000204795 781 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.92□□□□□ -0.34
Trim62Q80V85 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim62Q80V85 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim62Q80V85 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim62Q80V85 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim62Q80V85 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Gm11930-201ENSMUST00000117788 190 ntBASIC12.91□□□□□ -0.34
Trim62Q80V85 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim62Q80V85 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim62Q80V85 Gm43758-201ENSMUST00000199500 367 ntBASIC12.91□□□□□ -0.34
Trim62Q80V85 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim62Q80V85 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim62Q80V85 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim62Q80V85 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.91□□□□□ -0.34
Trim62Q80V85 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim62Q80V85 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms