Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh19Q80TF3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh19Q80TF3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pcdh19Q80TF3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh19Q80TF3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh19Q80TF3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm11597-201ENSMUST00000121423 964 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm14017-201ENSMUST00000121934 386 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm26361-201ENSMUST00000158868 186 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 AA914427-201ENSMUST00000193194 1166 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm18212-201ENSMUST00000211678 889 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm5363-201ENSMUST00000211927 938 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms