Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.15□□□□□ -0.31
Prpf38bQ80SY5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Prpf38bQ80SY5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Prpf38bQ80SY5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Prpf38bQ80SY5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Spcs1-203ENSMUST00000226374 592 ntBASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf38bQ80SY5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Gm14350-201ENSMUST00000116642 640 ntBASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Gm9062-201ENSMUST00000117712 727 ntBASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms