Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh8Q7TSK3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Gm13736-201ENSMUST00000119272 253 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Gm38317-201ENSMUST00000195564 343 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh8Q7TSK3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh8Q7TSK3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.33□□□□□ -0.43
Pcdh8Q7TSK3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms