Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Gm12314-201ENSMUST00000118104 538 ntBASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Gm14999-201ENSMUST00000121039 624 ntBASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Gm14017-201ENSMUST00000121934 386 ntBASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd1Q6PIP5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm12997-201ENSMUST00000120207 640 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm13315-201ENSMUST00000120376 991 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms