Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm12030-201ENSMUST00000121917 223 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm4310-201ENSMUST00000177847 889 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm5298-201ENSMUST00000201122 892 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm19640-201ENSMUST00000214849 464 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm13549-201ENSMUST00000118339 796 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm14942-201ENSMUST00000119642 336 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm18711-201ENSMUST00000199341 750 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm18463-201ENSMUST00000207258 474 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm18460-201ENSMUST00000208088 464 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm18041-201ENSMUST00000218210 618 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn9aQ62205 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.41□□□□□ -0.1
Scn9aQ62205 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn9aQ62205 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn9aQ62205 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.4□□□□□ -0.1
Scn9aQ62205 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.4□□□□□ -0.1
Scn9aQ62205 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.4□□□□□ -0.1
Scn9aQ62205 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Gm15207-201ENSMUST00000119259 442 ntBASIC14.4□□□□□ -0.1
Scn9aQ62205 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Gm9116-201ENSMUST00000192400 1018 ntBASIC14.4□□□□□ -0.1
Scn9aQ62205 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.4□□□□□ -0.1
Scn9aQ62205 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn9aQ62205 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn9aQ62205 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Scn9aQ62205 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Scn9aQ62205 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn9aQ62205 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.39□□□□□ -0.11
Scn9aQ62205 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.39□□□□□ -0.11
Scn9aQ62205 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.39□□□□□ -0.11
Scn9aQ62205 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn9aQ62205 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms