Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm14017-201ENSMUST00000121934 386 ntBASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm2260-201ENSMUST00000184965 657 ntBASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.78□□□□□ -0.36
Slc6a4Q60857 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a4Q60857 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Slc6a4Q60857 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a4Q60857 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.77□□□□□ -0.36
Slc6a4Q60857 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Slc6a4Q60857 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a4Q60857 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Slc6a4Q60857 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.77□□□□□ -0.36
Slc6a4Q60857 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a4Q60857 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc6a4Q60857 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.77□□□□□ -0.37
Slc6a4Q60857 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Gm37466-201ENSMUST00000195692 652 ntBASIC12.77□□□□□ -0.37
Slc6a4Q60857 Rprl1-202ENSMUST00000198476 238 ntBASIC12.77□□□□□ -0.37
Slc6a4Q60857 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc6a4Q60857 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.77□□□□□ -0.37
Slc6a4Q60857 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.77□□□□□ -0.37
Slc6a4Q60857 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.77□□□□□ -0.37
Slc6a4Q60857 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc6a4Q60857 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Gm14644-201ENSMUST00000116671 647 ntBASIC12.76□□□□□ -0.37
Slc6a4Q60857 Gm14208-201ENSMUST00000119645 678 ntBASIC12.76□□□□□ -0.37
Slc6a4Q60857 Gm24990-201ENSMUST00000157406 323 ntBASIC12.76□□□□□ -0.37
Slc6a4Q60857 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.76□□□□□ -0.37
Slc6a4Q60857 Gm44958-201ENSMUST00000203734 736 ntBASIC12.76□□□□□ -0.37
Slc6a4Q60857 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.76□□□□□ -0.37
Slc6a4Q60857 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.76□□□□□ -0.37
Slc6a4Q60857 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc6a4Q60857 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms