Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm24231-201ENSMUST00000104315 133 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm11531-201ENSMUST00000117614 555 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm11222-201ENSMUST00000119005 738 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Rmrp-201ENSMUST00000157463 271 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm43758-201ENSMUST00000199500 367 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm21769-201ENSMUST00000211922 111 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.96□□□□□ -0.49
Xrcc1Q60596 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.96□□□□□ -0.49
Xrcc1Q60596 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Xrcc1Q60596 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Paupar-201ENSMUST00000194826 3482 ntBASIC11.95□□□□□ -0.5
Xrcc1Q60596 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Mir6420-201ENSMUST00000185032 102 ntBASIC11.95□□□□□ -0.5
Xrcc1Q60596 Gm38341-201ENSMUST00000195357 515 ntBASIC11.95□□□□□ -0.5
Xrcc1Q60596 Gm44364-201ENSMUST00000198368 141 ntBASIC11.95□□□□□ -0.5
Xrcc1Q60596 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.95□□□□□ -0.5
Xrcc1Q60596 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.95□□□□□ -0.5
Xrcc1Q60596 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Xrcc1Q60596 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.94□□□□□ -0.5
Xrcc1Q60596 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.94□□□□□ -0.5
Xrcc1Q60596 Gm14760-201ENSMUST00000121831 999 ntBASIC11.94□□□□□ -0.5
Xrcc1Q60596 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Gm26956-201ENSMUST00000182176 986 ntBASIC11.94□□□□□ -0.5
Xrcc1Q60596 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.94□□□□□ -0.5
Xrcc1Q60596 Gm37201-201ENSMUST00000191845 523 ntBASIC11.94□□□□□ -0.5
Xrcc1Q60596 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Gm7783-201ENSMUST00000204795 781 ntBASIC11.94□□□□□ -0.5
Xrcc1Q60596 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Gm26035-201ENSMUST00000083065 308 ntBASIC11.94□□□□□ -0.5
Xrcc1Q60596 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Xrcc1Q60596 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms