Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Gm15808-201ENSMUST00000119046 604 ntBASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Gm25668-201ENSMUST00000157700 129 ntBASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Gm38317-201ENSMUST00000195564 343 ntBASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Gm44967-201ENSMUST00000207047 631 ntBASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps54Q5SPW0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps54Q5SPW0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps54Q5SPW0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps54Q5SPW0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps54Q5SPW0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps54Q5SPW0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm24830-201ENSMUST00000102024 166 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm25890-201ENSMUST00000177643 165 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm22614-201ENSMUST00000178300 165 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm22042-201ENSMUST00000082989 165 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm26232-201ENSMUST00000083360 166 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm26110-201ENSMUST00000083971 165 ntBASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps54Q5SPW0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms