Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm12502-201ENSMUST00000120197 444 ntBASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm15703-201ENSMUST00000120250 880 ntBASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm14760-201ENSMUST00000121831 999 ntBASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm9630-201ENSMUST00000178304 885 ntBASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm27731-201ENSMUST00000185192 107 ntBASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5d-4Q5R1F6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms