Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim41Q5NCC3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Mir1901-201ENSMUST00000122616 78 ntBASIC21.69■■□□□ 1.06
Trim41Q5NCC3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Gm22877-201ENSMUST00000175451 105 ntBASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Mir6546-201ENSMUST00000184460 62 ntBASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim41Q5NCC3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Gm12849-201ENSMUST00000120013 739 ntBASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Gm11450-201ENSMUST00000121144 333 ntBASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Trim41Q5NCC3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Gm43858-201ENSMUST00000199418 1778 ntBASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Gm6722-201ENSMUST00000221586 390 ntBASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim41Q5NCC3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Gm18626-201ENSMUST00000221512 1409 ntBASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Mir6998-201ENSMUST00000183343 64 ntBASIC21.66■■□□□ 1.06
Trim41Q5NCC3 CT485607.1-201ENSMUST00000216100 85 ntBASIC21.66■■□□□ 1.06
Trim41Q5NCC3 Gm19994-201ENSMUST00000217086 586 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms