Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Gm18212-201ENSMUST00000211678 889 ntBASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Mir3102-201ENSMUST00000175555 104 ntBASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rc3h1Q4VGL6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Gm13296-201ENSMUST00000117854 997 ntBASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Gm14277-201ENSMUST00000121195 360 ntBASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rc3h1Q4VGL6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Mir5132-201ENSMUST00000175166 71 ntBASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Rps4l-202ENSMUST00000204242 789 ntBASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Gm19994-201ENSMUST00000217086 586 ntBASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms