Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Gm38223-201ENSMUST00000194484 695 ntBASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.72□□□□□ -0.53
Trim40Q3UWA4 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.72□□□□□ -0.53
Trim40Q3UWA4 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm12151-201ENSMUST00000121374 290 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm14760-201ENSMUST00000121831 999 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm14719-201ENSMUST00000121891 340 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm5354-201ENSMUST00000182417 973 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Gm6458-201ENSMUST00000211573 635 ntBASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim40Q3UWA4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim40Q3UWA4 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms