Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm3890-201ENSMUST00000182416 207 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm44405-201ENSMUST00000198952 126 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm42599-201ENSMUST00000201308 469 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm6266-201ENSMUST00000203844 806 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm44882-201ENSMUST00000205702 802 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm45925-201ENSMUST00000218882 744 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Gm28047Q3US59 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Gm12314-201ENSMUST00000118104 538 ntBASIC14.19□□□□□ -0.14
Gm28047Q3US59 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.19□□□□□ -0.14
Gm28047Q3US59 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Gm6007-201ENSMUST00000208170 823 ntBASIC14.19□□□□□ -0.14
Gm28047Q3US59 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.19□□□□□ -0.14
Gm28047Q3US59 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.19□□□□□ -0.14
Gm28047Q3US59 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28047Q3US59 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gm13736-201ENSMUST00000119272 253 ntBASIC14.18□□□□□ -0.14
Gm28047Q3US59 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.18□□□□□ -0.14
Gm28047Q3US59 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28047Q3US59 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms