Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm14832-201ENSMUST00000121289 322 ntBASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm28882-201ENSMUST00000185504 314 ntBASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nhlrc4Q3UP44 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nhlrc4Q3UP44 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Mir1938-201ENSMUST00000158746 100 ntBASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nhlrc4Q3UP44 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms