Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm15824-201ENSMUST00000119516 955 ntBASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm11964-201ENSMUST00000120982 444 ntBASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Brf2Q3UAW9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Gm25927-201ENSMUST00000175058 117 ntBASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Gm27731-201ENSMUST00000185192 107 ntBASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Gm22058-201ENSMUST00000083393 310 ntBASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms