Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mmp25Q3U435 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mmp25Q3U435 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mmp25Q3U435 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm24255-201ENSMUST00000104481 128 ntBASIC11.76□□□□□ -0.53
Mmp25Q3U435 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm15547-201ENSMUST00000122152 333 ntBASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm28882-201ENSMUST00000185504 314 ntBASIC11.76□□□□□ -0.53
Mmp25Q3U435 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.76□□□□□ -0.53
Mmp25Q3U435 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Mmp25Q3U435 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Gm23119-201ENSMUST00000158610 140 ntBASIC11.75□□□□□ -0.53
Mmp25Q3U435 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Gm20482-202ENSMUST00000174729 825 ntBASIC11.75□□□□□ -0.53
Mmp25Q3U435 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Gm44958-201ENSMUST00000203734 736 ntBASIC11.75□□□□□ -0.53
Mmp25Q3U435 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Mmp25Q3U435 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.75□□□□□ -0.53
Mmp25Q3U435 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.75□□□□□ -0.53
Mmp25Q3U435 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.75□□□□□ -0.53
Mmp25Q3U435 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.75□□□□□ -0.53
Mmp25Q3U435 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mmp25Q3U435 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms