Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Gm15824-201ENSMUST00000119516 955 ntBASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Gm22121-201ENSMUST00000175148 54 ntBASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Gm8099-201ENSMUST00000200510 742 ntBASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43aQ3TL54 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43aQ3TL54 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm24231-201ENSMUST00000104315 133 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm8805-201ENSMUST00000117848 313 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm14127-201ENSMUST00000117906 678 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms