Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gm1401-201ENSMUST00000122048 772 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gm37714-201ENSMUST00000194742 342 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gm2272-201ENSMUST00000194903 582 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Mir497b-201ENSMUST00000093601 125 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Spata33-207ENSMUST00000212760 4074 ntBASIC10.22□□□□□ -0.77
Trim63Q38HM4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Trim63Q38HM4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.21□□□□□ -0.77
Trim63Q38HM4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.21□□□□□ -0.77
Trim63Q38HM4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.21□□□□□ -0.77
Trim63Q38HM4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim63Q38HM4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trim63Q38HM4 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trim63Q38HM4 Gm9877-201ENSMUST00000064271 2627 ntBASIC10.21□□□□□ -0.78
Trim63Q38HM4 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.21□□□□□ -0.78
Trim63Q38HM4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.21□□□□□ -0.78
Trim63Q38HM4 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trim63Q38HM4 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC10.21□□□□□ -0.78
Trim63Q38HM4 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trim63Q38HM4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trim63Q38HM4 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trim63Q38HM4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms