Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm12274-201ENSMUST00000120062 385 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm8152-201ENSMUST00000120842 637 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm2445-201ENSMUST00000182798 989 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm2566-201ENSMUST00000201267 431 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm39288-201ENSMUST00000210554 446 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm15196-201ENSMUST00000121406 482 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm6606-201ENSMUST00000193613 947 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.12□□□□□ -0.63
Chd8Q09XV5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd8Q09XV5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.11□□□□□ -0.63
Chd8Q09XV5 Gm37207-201ENSMUST00000194284 296 ntBASIC11.11□□□□□ -0.63
Chd8Q09XV5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.11□□□□□ -0.63
Chd8Q09XV5 Gm43506-201ENSMUST00000200675 753 ntBASIC11.11□□□□□ -0.63
Chd8Q09XV5 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.11□□□□□ -0.63
Chd8Q09XV5 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Gm5292-201ENSMUST00000073317 580 ntBASIC11.11□□□□□ -0.63
Chd8Q09XV5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms