Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.93□□□□□ -0.34
Vps45P97390 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.93□□□□□ -0.34
Vps45P97390 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps45P97390 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.93□□□□□ -0.34
Vps45P97390 Gm4909-201ENSMUST00000118749 794 ntBASIC12.93□□□□□ -0.34
Vps45P97390 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.93□□□□□ -0.34
Vps45P97390 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Vps45P97390 Gm42997-202ENSMUST00000200321 985 ntBASIC12.93□□□□□ -0.34
Vps45P97390 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.93□□□□□ -0.34
Vps45P97390 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps45P97390 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vps45P97390 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vps45P97390 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps45P97390 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vps45P97390 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Vps45P97390 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Vps45P97390 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vps45P97390 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.92□□□□□ -0.34
Vps45P97390 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps45P97390 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.92□□□□□ -0.34
Vps45P97390 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.92□□□□□ -0.34
Vps45P97390 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Vps45P97390 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.92□□□□□ -0.34
Vps45P97390 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Gm8738-201ENSMUST00000172606 329 ntBASIC12.92□□□□□ -0.34
Vps45P97390 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Gm2260-201ENSMUST00000184965 657 ntBASIC12.92□□□□□ -0.34
Vps45P97390 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps45P97390 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.92□□□□□ -0.34
Vps45P97390 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.92□□□□□ -0.34
Vps45P97390 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps45P97390 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps45P97390 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps45P97390 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps45P97390 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vps45P97390 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps45P97390 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps45P97390 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.91□□□□□ -0.34
Vps45P97390 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps45P97390 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms