Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gbx1P82976 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gbx1P82976 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gbx1P82976 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gbx1P82976 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gbx1P82976 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gbx1P82976 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gbx1P82976 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Gbx1P82976 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gbx1P82976 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gbx1P82976 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gbx1P82976 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Gbx1P82976 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.73□□□□□ -0.53
Gbx1P82976 Gm16177-201ENSMUST00000120728 718 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Gm27682-201ENSMUST00000183930 110 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.73□□□□□ -0.53
Gbx1P82976 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Gm7653-201ENSMUST00000214567 508 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gbx1P82976 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Gm24526-201ENSMUST00000082921 158 ntBASIC11.73□□□□□ -0.53
Gbx1P82976 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx1P82976 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.73□□□□□ -0.53
Gbx1P82976 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Gbx1P82976 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Map1b-203ENSMUST00000223725 2669 ntBASIC11.72□□□□□ -0.53
Gbx1P82976 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.72□□□□□ -0.53
Gbx1P82976 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Gm29649-201ENSMUST00000185649 419 ntBASIC11.72□□□□□ -0.53
Gbx1P82976 Gm29127-201ENSMUST00000188304 517 ntBASIC11.72□□□□□ -0.53
Gbx1P82976 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.72□□□□□ -0.53
Gbx1P82976 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.72□□□□□ -0.53
Gbx1P82976 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.72□□□□□ -0.53
Gbx1P82976 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Gbx1P82976 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Gbx1P82976 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.72□□□□□ -0.53
Gbx1P82976 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.72□□□□□ -0.53
Gbx1P82976 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gbx1P82976 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Gbx1P82976 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx1P82976 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.71□□□□□ -0.53
Gbx1P82976 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gbx1P82976 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx1P82976 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.71□□□□□ -0.53
Gbx1P82976 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx1P82976 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx1P82976 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms