Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Rpl39P62892 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC8.89□□□□□ -0.99
Rpl39P62892 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rpl39P62892 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC8.89□□□□□ -0.99
Rpl39P62892 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC8.89□□□□□ -0.99
Rpl39P62892 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC8.89□□□□□ -0.99
Rpl39P62892 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC8.89□□□□□ -0.99
Rpl39P62892 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Gm2756-201ENSMUST00000195851 400 ntBASIC8.89□□□□□ -0.99
Rpl39P62892 Gm44069-201ENSMUST00000204898 506 ntBASIC8.89□□□□□ -0.99
Rpl39P62892 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Rpl39P62892 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Gm8227-201ENSMUST00000223306 571 ntBASIC8.89□□□□□ -0.99
Rpl39P62892 AC126408.1-201ENSMUST00000225184 523 ntBASIC8.89□□□□□ -0.99
Rpl39P62892 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rpl39P62892 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC8.89□□□□□ -0.99
Rpl39P62892 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Rpl39P62892 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC8.89□□□□□ -0.99
Rpl39P62892 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Rpl39P62892 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rpl39P62892 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39P62892 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rpl39P62892 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rpl39P62892 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC8.88□□□□□ -0.99
Rpl39P62892 Gm16342-201ENSMUST00000124025 1025 ntBASIC8.88□□□□□ -0.99
Rpl39P62892 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rpl39P62892 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rpl39P62892 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Gm14132-201ENSMUST00000117188 1719 ntBASIC8.88□□□□□ -0.99
Rpl39P62892 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC8.88□□□□□ -0.99
Rpl39P62892 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC8.88□□□□□ -0.99
Rpl39P62892 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rpl39P62892 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rpl39P62892 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Rpl39P62892 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC8.87□□□□□ -0.99
Rpl39P62892 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms