Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp25P57080 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp25P57080 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp25P57080 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp25P57080 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp25P57080 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp25P57080 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp25P57080 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp25P57080 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp25P57080 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.12□□□□□ -0.15
Usp25P57080 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp25P57080 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp25P57080 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp25P57080 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp25P57080 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usp25P57080 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usp25P57080 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp25P57080 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.12□□□□□ -0.15
Usp25P57080 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp25P57080 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp25P57080 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp25P57080 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usp25P57080 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp25P57080 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Usp25P57080 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp25P57080 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp25P57080 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp25P57080 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
Usp25P57080 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.11□□□□□ -0.15
Usp25P57080 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp25P57080 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Usp25P57080 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp25P57080 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp25P57080 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Usp25P57080 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.11□□□□□ -0.15
Usp25P57080 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp25P57080 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp25P57080 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp25P57080 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp25P57080 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp25P57080 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp25P57080 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Gm15703-201ENSMUST00000120250 880 ntBASIC14.1□□□□□ -0.15
Usp25P57080 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp25P57080 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp25P57080 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.1□□□□□ -0.15
Usp25P57080 Gm18473-201ENSMUST00000220543 868 ntBASIC14.1□□□□□ -0.15
Usp25P57080 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp25P57080 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms