Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Sssca1P56873 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sssca1P56873 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.08□□□□□ -0.8
Sssca1P56873 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sssca1P56873 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Sssca1P56873 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Sssca1P56873 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Sssca1P56873 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.08□□□□□ -0.8
Sssca1P56873 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 Gm37917-201ENSMUST00000194711 392 ntBASIC10.08□□□□□ -0.8
Sssca1P56873 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 Gm18624-201ENSMUST00000220966 658 ntBASIC10.08□□□□□ -0.8
Sssca1P56873 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.08□□□□□ -0.8
Sssca1P56873 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Sssca1P56873 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sssca1P56873 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.07□□□□□ -0.8
Sssca1P56873 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.07□□□□□ -0.8
Sssca1P56873 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.07□□□□□ -0.8
Sssca1P56873 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sssca1P56873 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Sssca1P56873 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Gm12928-201ENSMUST00000117115 573 ntBASIC10.07□□□□□ -0.8
Sssca1P56873 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.07□□□□□ -0.8
Sssca1P56873 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.07□□□□□ -0.8
Sssca1P56873 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.07□□□□□ -0.8
Sssca1P56873 Gm8099-201ENSMUST00000200510 742 ntBASIC10.07□□□□□ -0.8
Sssca1P56873 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.07□□□□□ -0.8
Sssca1P56873 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sssca1P56873 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms