Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdh11P55288 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.41□□□□□ -0.58
Cdh11P55288 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cdh11P55288 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.41□□□□□ -0.58
Cdh11P55288 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.41□□□□□ -0.58
Cdh11P55288 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.4□□□□□ -0.58
Cdh11P55288 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.4□□□□□ -0.58
Cdh11P55288 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.4□□□□□ -0.58
Cdh11P55288 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Gm13392-201ENSMUST00000117708 150 ntBASIC11.4□□□□□ -0.58
Cdh11P55288 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.4□□□□□ -0.58
Cdh11P55288 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cdh11P55288 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cdh11P55288 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdh11P55288 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh11P55288 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh11P55288 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.4□□□□□ -0.59
Cdh11P55288 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh11P55288 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh11P55288 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Cdh11P55288 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh11P55288 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh11P55288 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh11P55288 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Cdh11P55288 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
Cdh11P55288 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.39□□□□□ -0.59
Cdh11P55288 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm11618-201ENSMUST00000117946 267 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.39□□□□□ -0.59
Cdh11P55288 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm4271-201ENSMUST00000174444 973 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.39□□□□□ -0.59
Cdh11P55288 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm37922-201ENSMUST00000195596 455 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms