Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.49□□□□□ -0.25
Nub1P54729 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.49□□□□□ -0.25
Nub1P54729 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.49□□□□□ -0.25
Nub1P54729 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.49□□□□□ -0.25
Nub1P54729 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Gm42693-201ENSMUST00000196779 631 ntBASIC13.49□□□□□ -0.25
Nub1P54729 Gm43630-201ENSMUST00000201550 776 ntBASIC13.49□□□□□ -0.25
Nub1P54729 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.49□□□□□ -0.25
Nub1P54729 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.49□□□□□ -0.25
Nub1P54729 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.49□□□□□ -0.25
Nub1P54729 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.49□□□□□ -0.25
Nub1P54729 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.49□□□□□ -0.25
Nub1P54729 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nub1P54729 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nub1P54729 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.48□□□□□ -0.25
Nub1P54729 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nub1P54729 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.48□□□□□ -0.25
Nub1P54729 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Nub1P54729 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Pck2-205ENSMUST00000226352 2784 ntBASIC13.48□□□□□ -0.25
Nub1P54729 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.48□□□□□ -0.25
Nub1P54729 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Gm11793-201ENSMUST00000120433 981 ntBASIC13.48□□□□□ -0.25
Nub1P54729 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.48□□□□□ -0.25
Nub1P54729 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.48□□□□□ -0.25
Nub1P54729 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.48□□□□□ -0.25
Nub1P54729 Gm5904-201ENSMUST00000210286 865 ntBASIC13.48□□□□□ -0.25
Nub1P54729 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.48□□□□□ -0.25
Nub1P54729 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nub1P54729 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nub1P54729 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.48□□□□□ -0.25
Nub1P54729 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.48□□□□□ -0.25
Nub1P54729 Map1b-203ENSMUST00000223725 2669 ntBASIC13.47□□□□□ -0.25
Nub1P54729 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nub1P54729 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nub1P54729 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.47□□□□□ -0.25
Nub1P54729 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nub1P54729 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Nub1P54729 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.47□□□□□ -0.25
Nub1P54729 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Gm26035-201ENSMUST00000083065 308 ntBASIC13.47□□□□□ -0.25
Nub1P54729 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nub1P54729 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms