Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Morn2-202ENSMUST00000227729 656 ntBASIC12.35□□□□□ -0.43
Pdx1P52946 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pdx1P52946 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.35□□□□□ -0.43
Pdx1P52946 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pdx1P52946 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdx1P52946 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdx1P52946 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pdx1P52946 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.34□□□□□ -0.43
Pdx1P52946 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.34□□□□□ -0.43
Pdx1P52946 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Pdx1P52946 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Pdx1P52946 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Pdx1P52946 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Gm18304-201ENSMUST00000189162 546 ntBASIC12.34□□□□□ -0.43
Pdx1P52946 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.34□□□□□ -0.43
Pdx1P52946 Gm37489-201ENSMUST00000191883 159 ntBASIC12.34□□□□□ -0.43
Pdx1P52946 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.34□□□□□ -0.43
Pdx1P52946 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdx1P52946 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdx1P52946 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Pdx1P52946 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdx1P52946 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm14999-201ENSMUST00000121039 624 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.33□□□□□ -0.44
Pdx1P52946 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdx1P52946 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm37201-201ENSMUST00000191845 523 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms