Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm38223-201ENSMUST00000194484 695 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.34□□□□□ -0.75
Nkx2-1P50220 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.34□□□□□ -0.75
Nkx2-1P50220 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Gm42599-201ENSMUST00000201308 469 ntBASIC10.34□□□□□ -0.75
Nkx2-1P50220 Gm7730-201ENSMUST00000212486 454 ntBASIC10.34□□□□□ -0.75
Nkx2-1P50220 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-1P50220 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.33□□□□□ -0.76
Nkx2-1P50220 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.33□□□□□ -0.76
Nkx2-1P50220 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Gm16215-201ENSMUST00000161990 637 ntBASIC10.33□□□□□ -0.76
Nkx2-1P50220 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms