Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
LmnaP48678 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Gm13333-201ENSMUST00000119424 781 ntBASIC13.08□□□□□ -0.32
LmnaP48678 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.08□□□□□ -0.32
LmnaP48678 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.08□□□□□ -0.32
LmnaP48678 Gm31256-201ENSMUST00000194705 506 ntBASIC13.08□□□□□ -0.32
LmnaP48678 Gm43037-201ENSMUST00000196808 250 ntBASIC13.08□□□□□ -0.32
LmnaP48678 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
LmnaP48678 Gm30285-201ENSMUST00000214614 422 ntBASIC13.08□□□□□ -0.32
LmnaP48678 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.08□□□□□ -0.32
LmnaP48678 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.08□□□□□ -0.32
LmnaP48678 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.08□□□□□ -0.32
LmnaP48678 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.08□□□□□ -0.32
LmnaP48678 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
LmnaP48678 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LmnaP48678 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.08□□□□□ -0.32
LmnaP48678 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.08□□□□□ -0.32
LmnaP48678 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LmnaP48678 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
LmnaP48678 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LmnaP48678 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LmnaP48678 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
LmnaP48678 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Gm6447-201ENSMUST00000118905 835 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Gm13123-201ENSMUST00000122173 492 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Mir1943-201ENSMUST00000158276 73 ntBASIC13.07□□□□□ -0.32
LmnaP48678 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Gm26956-201ENSMUST00000182176 986 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Gm27023-201ENSMUST00000182372 285 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Gm9723-201ENSMUST00000192100 457 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Gm37042-201ENSMUST00000193816 581 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Gm19080-201ENSMUST00000196082 550 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Gm5781-201ENSMUST00000219792 443 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LmnaP48678 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.07□□□□□ -0.32
LmnaP48678 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LmnaP48678 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LmnaP48678 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LmnaP48678 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.06□□□□□ -0.32
LmnaP48678 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.06□□□□□ -0.32
LmnaP48678 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.06□□□□□ -0.32
LmnaP48678 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.06□□□□□ -0.32
LmnaP48678 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
LmnaP48678 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LmnaP48678 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.06□□□□□ -0.32
LmnaP48678 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms