Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GdnfP48540 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GdnfP48540 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
GdnfP48540 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.98□□□□□ -0.65
GdnfP48540 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Gm5687-201ENSMUST00000118252 640 ntBASIC10.98□□□□□ -0.65
GdnfP48540 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Gm7063-201ENSMUST00000186840 981 ntBASIC10.98□□□□□ -0.65
GdnfP48540 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.98□□□□□ -0.65
GdnfP48540 Itm2b-204ENSMUST00000228637 783 ntBASIC10.98□□□□□ -0.65
GdnfP48540 AC124408.1-201ENSMUST00000228938 707 ntBASIC10.98□□□□□ -0.65
GdnfP48540 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.98□□□□□ -0.65
GdnfP48540 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.98□□□□□ -0.65
GdnfP48540 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.98□□□□□ -0.65
GdnfP48540 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
GdnfP48540 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
GdnfP48540 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.97□□□□□ -0.65
GdnfP48540 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
GdnfP48540 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
GdnfP48540 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.97□□□□□ -0.65
GdnfP48540 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Gm14350-201ENSMUST00000116642 640 ntBASIC10.97□□□□□ -0.65
GdnfP48540 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.97□□□□□ -0.65
GdnfP48540 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.97□□□□□ -0.65
GdnfP48540 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Gm6152-201ENSMUST00000151704 340 ntBASIC10.97□□□□□ -0.65
GdnfP48540 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.97□□□□□ -0.65
GdnfP48540 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.97□□□□□ -0.65
GdnfP48540 Gm18363-201ENSMUST00000221671 730 ntBASIC10.97□□□□□ -0.65
GdnfP48540 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
GdnfP48540 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
GdnfP48540 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
GdnfP48540 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.97□□□□□ -0.65
GdnfP48540 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
GdnfP48540 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.97□□□□□ -0.65
GdnfP48540 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
GdnfP48540 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.97□□□□□ -0.65
GdnfP48540 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
GdnfP48540 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms