Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prox1P48437 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prox1P48437 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Prox1P48437 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prox1P48437 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prox1P48437 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prox1P48437 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prox1P48437 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.01□□□□□ -0.49
Prox1P48437 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.01□□□□□ -0.49
Prox1P48437 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Prox1P48437 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.01□□□□□ -0.49
Prox1P48437 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.01□□□□□ -0.49
Prox1P48437 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Prox1P48437 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Gm12859-201ENSMUST00000117834 427 ntBASIC12.01□□□□□ -0.49
Prox1P48437 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Gm44397-201ENSMUST00000195950 113 ntBASIC12.01□□□□□ -0.49
Prox1P48437 Gm35960-201ENSMUST00000202712 767 ntBASIC12.01□□□□□ -0.49
Prox1P48437 Gm6458-201ENSMUST00000211573 635 ntBASIC12.01□□□□□ -0.49
Prox1P48437 Gm6983-201ENSMUST00000214912 628 ntBASIC12.01□□□□□ -0.49
Prox1P48437 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.01□□□□□ -0.49
Prox1P48437 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.01□□□□□ -0.49
Prox1P48437 Itm2b-204ENSMUST00000228637 783 ntBASIC12.01□□□□□ -0.49
Prox1P48437 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Prox1P48437 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Prox1P48437 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.01□□□□□ -0.49
Prox1P48437 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prox1P48437 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Prox1P48437 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prox1P48437 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Prox1P48437 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Prox1P48437 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prox1P48437 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prox1P48437 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12□□□□□ -0.49
Prox1P48437 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Prox1P48437 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prox1P48437 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Prox1P48437 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12□□□□□ -0.49
Prox1P48437 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Gm11978-201ENSMUST00000122315 466 ntBASIC12□□□□□ -0.49
Prox1P48437 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Prox1P48437 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12□□□□□ -0.49
Prox1P48437 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Gm16372-201ENSMUST00000073088 450 ntBASIC12□□□□□ -0.49
Prox1P48437 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12□□□□□ -0.49
Prox1P48437 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms