Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.12□□□□□ -0.47
Sox18P43680 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.12□□□□□ -0.47
Sox18P43680 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.12□□□□□ -0.47
Sox18P43680 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.12□□□□□ -0.47
Sox18P43680 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Sox18P43680 Gm10051-201ENSMUST00000145209 414 ntBASIC12.12□□□□□ -0.47
Sox18P43680 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.12□□□□□ -0.47
Sox18P43680 Gm17391-201ENSMUST00000171036 126 ntBASIC12.12□□□□□ -0.47
Sox18P43680 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.12□□□□□ -0.47
Sox18P43680 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.12□□□□□ -0.47
Sox18P43680 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.12□□□□□ -0.47
Sox18P43680 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox18P43680 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Gm25131-201ENSMUST00000082653 151 ntBASIC12.12□□□□□ -0.47
Sox18P43680 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sox18P43680 AC140393.3-201ENSMUST00000228396 1352 ntBASIC12.12□□□□□ -0.47
Sox18P43680 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox18P43680 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox18P43680 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.11□□□□□ -0.47
Sox18P43680 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.11□□□□□ -0.47
Sox18P43680 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Gm12165-201ENSMUST00000117047 342 ntBASIC12.11□□□□□ -0.47
Sox18P43680 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.11□□□□□ -0.47
Sox18P43680 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.11□□□□□ -0.47
Sox18P43680 Gm28180-201ENSMUST00000189608 722 ntBASIC12.11□□□□□ -0.47
Sox18P43680 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.11□□□□□ -0.47
Sox18P43680 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.11□□□□□ -0.47
Sox18P43680 Gm4607-201ENSMUST00000206649 577 ntBASIC12.11□□□□□ -0.47
Sox18P43680 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.11□□□□□ -0.47
Sox18P43680 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.11□□□□□ -0.47
Sox18P43680 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.11□□□□□ -0.47
Sox18P43680 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox18P43680 Gm5369-201ENSMUST00000217499 588 ntBASIC12.11□□□□□ -0.47
Sox18P43680 AC131743.3-201ENSMUST00000222099 662 ntBASIC12.11□□□□□ -0.47
Sox18P43680 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox18P43680 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sox18P43680 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Sox18P43680 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox18P43680 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms