Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gm12363-201ENSMUST00000122250 668 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 Mir1894-201ENSMUST00000122802 81 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gm17794-201ENSMUST00000220252 955 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.05□□□□□ -0.48
Tnfsf4P43488 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfsf4P43488 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.04□□□□□ -0.48
Tnfsf4P43488 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm8652-201ENSMUST00000181363 964 ntBASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm38092-201ENSMUST00000195600 653 ntBASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm6745-201ENSMUST00000199216 526 ntBASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Gm24526-201ENSMUST00000082921 158 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms