Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh4P39038 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Cdh4P39038 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh4P39038 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh4P39038 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Gm15198-201ENSMUST00000117283 177 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdh4P39038 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh4P39038 Gm27516-201ENSMUST00000184237 98 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh4P39038 Gm8227-201ENSMUST00000223306 571 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 Morn2-202ENSMUST00000227729 656 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.98□□□□□ -0.49
Cdh4P39038 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh4P39038 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh4P39038 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh4P39038 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh4P39038 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdh4P39038 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.97□□□□□ -0.49
Cdh4P39038 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdh4P39038 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.97□□□□□ -0.49
Cdh4P39038 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.97□□□□□ -0.49
Cdh4P39038 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Cdh4P39038 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Rmrp-201ENSMUST00000157463 271 ntBASIC11.97□□□□□ -0.49
Cdh4P39038 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Cdh4P39038 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdh4P39038 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.97□□□□□ -0.49
Cdh4P39038 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.97□□□□□ -0.49
Cdh4P39038 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.97□□□□□ -0.49
Cdh4P39038 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh4P39038 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh4P39038 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Cdh4P39038 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cdh4P39038 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh4P39038 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Cdh4P39038 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms