Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.95□□□□□ -0.66
Upk2P38575 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Upk2P38575 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Upk2P38575 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Upk2P38575 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Upk2P38575 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Upk2P38575 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Upk2P38575 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Upk2P38575 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Upk2P38575 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Upk2P38575 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.94□□□□□ -0.66
Upk2P38575 Gm13342-201ENSMUST00000121055 207 ntBASIC10.94□□□□□ -0.66
Upk2P38575 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Gm23119-201ENSMUST00000158610 140 ntBASIC10.94□□□□□ -0.66
Upk2P38575 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Upk2P38575 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.94□□□□□ -0.66
Upk2P38575 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.94□□□□□ -0.66
Upk2P38575 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.94□□□□□ -0.66
Upk2P38575 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.94□□□□□ -0.66
Upk2P38575 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.94□□□□□ -0.66
Upk2P38575 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
Upk2P38575 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Upk2P38575 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Upk2P38575 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk2P38575 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.94□□□□□ -0.66
Upk2P38575 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Upk2P38575 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.93□□□□□ -0.66
Upk2P38575 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Upk2P38575 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Upk2P38575 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Upk2P38575 Gm23931-201ENSMUST00000103842 109 ntBASIC10.93□□□□□ -0.66
Upk2P38575 Mir1247-201ENSMUST00000116706 82 ntBASIC10.93□□□□□ -0.66
Upk2P38575 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.93□□□□□ -0.66
Upk2P38575 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.93□□□□□ -0.66
Upk2P38575 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.93□□□□□ -0.66
Upk2P38575 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.93□□□□□ -0.66
Upk2P38575 Gm44882-201ENSMUST00000205702 802 ntBASIC10.93□□□□□ -0.66
Upk2P38575 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.93□□□□□ -0.66
Upk2P38575 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Gm10076-201ENSMUST00000073238 384 ntBASIC10.93□□□□□ -0.66
Upk2P38575 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Upk2P38575 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Upk2P38575 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Upk2P38575 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Upk2P38575 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk2P38575 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Upk2P38575 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms