Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Gm14057-201ENSMUST00000120631 482 ntBASIC13.17□□□□□ -0.3
Rfc1P35601 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.17□□□□□ -0.3
Rfc1P35601 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rfc1P35601 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Gm19078-201ENSMUST00000206311 727 ntBASIC13.17□□□□□ -0.3
Rfc1P35601 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rfc1P35601 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.17□□□□□ -0.3
Rfc1P35601 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.17□□□□□ -0.3
Rfc1P35601 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.16□□□□□ -0.3
Rfc1P35601 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rfc1P35601 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rfc1P35601 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rfc1P35601 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.16□□□□□ -0.3
Rfc1P35601 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.16□□□□□ -0.3
Rfc1P35601 Gm15376-201ENSMUST00000122258 783 ntBASIC13.16□□□□□ -0.3
Rfc1P35601 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.16□□□□□ -0.3
Rfc1P35601 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.16□□□□□ -0.3
Rfc1P35601 Gm26464-201ENSMUST00000157094 305 ntBASIC13.16□□□□□ -0.3
Rfc1P35601 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rfc1P35601 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.16□□□□□ -0.3
Rfc1P35601 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
Rfc1P35601 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rfc1P35601 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.16□□□□□ -0.3
Rfc1P35601 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rfc1P35601 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfc1P35601 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.16□□□□□ -0.3
Rfc1P35601 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Rfc1P35601 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfc1P35601 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.15□□□□□ -0.3
Rfc1P35601 Gm37368-201ENSMUST00000193173 3212 ntBASIC13.15□□□□□ -0.3
Rfc1P35601 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.15□□□□□ -0.3
Rfc1P35601 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Gm11524-201ENSMUST00000119349 807 ntBASIC13.15□□□□□ -0.3
Rfc1P35601 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.15□□□□□ -0.3
Rfc1P35601 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfc1P35601 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Gm42612-201ENSMUST00000197986 623 ntBASIC13.15□□□□□ -0.3
Rfc1P35601 Gm43170-201ENSMUST00000199827 612 ntBASIC13.15□□□□□ -0.3
Rfc1P35601 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfc1P35601 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rfc1P35601 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfc1P35601 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfc1P35601 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rfc1P35601 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms