Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm12485-201ENSMUST00000119641 291 ntBASIC11.5□□□□□ -0.57
Nedd8P29595 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nedd8P29595 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.5□□□□□ -0.57
Nedd8P29595 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.5□□□□□ -0.57
Nedd8P29595 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nedd8P29595 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.5□□□□□ -0.57
Nedd8P29595 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nedd8P29595 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.49□□□□□ -0.57
Nedd8P29595 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nedd8P29595 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nedd8P29595 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.49□□□□□ -0.57
Nedd8P29595 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.49□□□□□ -0.57
Nedd8P29595 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.49□□□□□ -0.57
Nedd8P29595 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nedd8P29595 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.49□□□□□ -0.57
Nedd8P29595 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.49□□□□□ -0.57
Nedd8P29595 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nedd8P29595 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nedd8P29595 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nedd8P29595 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.48□□□□□ -0.57
Nedd8P29595 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.48□□□□□ -0.57
Nedd8P29595 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nedd8P29595 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.48□□□□□ -0.57
Nedd8P29595 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.48□□□□□ -0.57
Nedd8P29595 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.48□□□□□ -0.57
Nedd8P29595 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nedd8P29595 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.48□□□□□ -0.57
Nedd8P29595 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Nedd8P29595 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.48□□□□□ -0.57
Nedd8P29595 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms