Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp3P28862 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp3P28862 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Mmp3P28862 Gm5616-201ENSMUST00000165252 384 ntBASIC13.35□□□□□ -0.27
Mmp3P28862 Gm17040-202ENSMUST00000170597 889 ntBASIC13.35□□□□□ -0.27
Mmp3P28862 Gm8741-201ENSMUST00000174736 384 ntBASIC13.35□□□□□ -0.27
Mmp3P28862 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp3P28862 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp3P28862 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.35□□□□□ -0.27
Mmp3P28862 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Mmp3P28862 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp3P28862 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.34□□□□□ -0.27
Mmp3P28862 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Mmp3P28862 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp3P28862 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.34□□□□□ -0.27
Mmp3P28862 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Mmp3P28862 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp3P28862 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp3P28862 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp3P28862 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.33□□□□□ -0.28
Mmp3P28862 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mmp3P28862 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mmp3P28862 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Mmp3P28862 Gm15711-201ENSMUST00000118889 535 ntBASIC13.33□□□□□ -0.28
Mmp3P28862 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.33□□□□□ -0.28
Mmp3P28862 Gm12266-201ENSMUST00000120311 962 ntBASIC13.33□□□□□ -0.28
Mmp3P28862 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.33□□□□□ -0.28
Mmp3P28862 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.33□□□□□ -0.28
Mmp3P28862 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mmp3P28862 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mmp3P28862 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.33□□□□□ -0.28
Mmp3P28862 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mmp3P28862 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Mmp3P28862 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.33□□□□□ -0.28
Mmp3P28862 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mmp3P28862 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp3P28862 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp3P28862 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.32□□□□□ -0.28
Mmp3P28862 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms