Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.53□□□□□ -0.4
RxrbP28704 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.53□□□□□ -0.4
RxrbP28704 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Gm24231-201ENSMUST00000104315 133 ntBASIC12.53□□□□□ -0.4
RxrbP28704 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.53□□□□□ -0.4
RxrbP28704 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Gm45668-201ENSMUST00000211271 493 ntBASIC12.53□□□□□ -0.4
RxrbP28704 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.53□□□□□ -0.4
RxrbP28704 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RxrbP28704 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.53□□□□□ -0.4
RxrbP28704 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
RxrbP28704 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RxrbP28704 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RxrbP28704 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
RxrbP28704 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
RxrbP28704 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RxrbP28704 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RxrbP28704 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RxrbP28704 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RxrbP28704 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.52□□□□□ -0.41
RxrbP28704 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.52□□□□□ -0.41
RxrbP28704 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.52□□□□□ -0.41
RxrbP28704 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RxrbP28704 Gm28693-202ENSMUST00000190758 331 ntBASIC12.52□□□□□ -0.41
RxrbP28704 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.52□□□□□ -0.41
RxrbP28704 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.52□□□□□ -0.41
RxrbP28704 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.52□□□□□ -0.41
RxrbP28704 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.52□□□□□ -0.41
RxrbP28704 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RxrbP28704 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.52□□□□□ -0.41
RxrbP28704 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RxrbP28704 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.52□□□□□ -0.41
RxrbP28704 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RxrbP28704 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.52□□□□□ -0.41
RxrbP28704 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.51□□□□□ -0.41
RxrbP28704 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RxrbP28704 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RxrbP28704 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.51□□□□□ -0.41
RxrbP28704 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.51□□□□□ -0.41
RxrbP28704 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RxrbP28704 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.51□□□□□ -0.41
RxrbP28704 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RxrbP28704 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RxrbP28704 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RxrbP28704 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RxrbP28704 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms