Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.47□□□□□ -0.09
Pde6aP27664 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.47□□□□□ -0.09
Pde6aP27664 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pde6aP27664 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Gm8712-201ENSMUST00000221090 701 ntBASIC14.47□□□□□ -0.09
Pde6aP27664 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pde6aP27664 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pde6aP27664 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pde6aP27664 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pde6aP27664 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6aP27664 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Pde6aP27664 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Pde6aP27664 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Gm14726-201ENSMUST00000120623 896 ntBASIC14.46□□□□□ -0.09
Pde6aP27664 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Pde6aP27664 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.46□□□□□ -0.09
Pde6aP27664 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.46□□□□□ -0.09
Pde6aP27664 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.46□□□□□ -0.09
Pde6aP27664 Gm3961-201ENSMUST00000204425 994 ntBASIC14.46□□□□□ -0.09
Pde6aP27664 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pde6aP27664 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6aP27664 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6aP27664 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pde6aP27664 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6aP27664 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6aP27664 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6aP27664 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6aP27664 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6aP27664 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pde6aP27664 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Gm24255-201ENSMUST00000104481 128 ntBASIC14.45□□□□□ -0.1
Pde6aP27664 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pde6aP27664 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.45□□□□□ -0.1
Pde6aP27664 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Gm37259-201ENSMUST00000193903 849 ntBASIC14.45□□□□□ -0.1
Pde6aP27664 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.45□□□□□ -0.1
Pde6aP27664 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.45□□□□□ -0.1
Pde6aP27664 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pde6aP27664 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.45□□□□□ -0.1
Pde6aP27664 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pde6aP27664 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Pde6aP27664 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.45□□□□□ -0.1
Pde6aP27664 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.45□□□□□ -0.1
Pde6aP27664 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.45□□□□□ -0.1
Pde6aP27664 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6aP27664 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pde6aP27664 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.44□□□□□ -0.1
Pde6aP27664 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.44□□□□□ -0.1
Pde6aP27664 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6aP27664 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Gm22323-201ENSMUST00000103832 109 ntBASIC14.44□□□□□ -0.1
Pde6aP27664 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.44□□□□□ -0.1
Pde6aP27664 Gm7584-201ENSMUST00000175829 940 ntBASIC14.44□□□□□ -0.1
Pde6aP27664 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms