Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.62□□□□□ -0.23
Chmp6P0C0A3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Gm18054-201ENSMUST00000207539 555 ntBASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Gm6013-201ENSMUST00000212264 699 ntBASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.61□□□□□ -0.23
Chmp6P0C0A3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp6P0C0A3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms