Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.82□□□□□ -0.52
ApoeP08226 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.82□□□□□ -0.52
ApoeP08226 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.81□□□□□ -0.52
ApoeP08226 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.81□□□□□ -0.52
ApoeP08226 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.81□□□□□ -0.52
ApoeP08226 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
ApoeP08226 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ApoeP08226 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ApoeP08226 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ApoeP08226 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ApoeP08226 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.81□□□□□ -0.52
ApoeP08226 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.81□□□□□ -0.52
ApoeP08226 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Gm15429-201ENSMUST00000151268 798 ntBASIC11.81□□□□□ -0.52
ApoeP08226 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.81□□□□□ -0.52
ApoeP08226 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ApoeP08226 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ApoeP08226 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.81□□□□□ -0.52
ApoeP08226 Syt7-204ENSMUST00000223586 1344 ntBASIC11.81□□□□□ -0.52
ApoeP08226 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.81□□□□□ -0.52
ApoeP08226 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
ApoeP08226 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ApoeP08226 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
ApoeP08226 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.8□□□□□ -0.52
ApoeP08226 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.8□□□□□ -0.52
ApoeP08226 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Gm24231-201ENSMUST00000104315 133 ntBASIC11.8□□□□□ -0.52
ApoeP08226 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.8□□□□□ -0.52
ApoeP08226 Gm22121-201ENSMUST00000175148 54 ntBASIC11.8□□□□□ -0.52
ApoeP08226 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.8□□□□□ -0.52
ApoeP08226 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.8□□□□□ -0.52
ApoeP08226 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ApoeP08226 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.8□□□□□ -0.52
ApoeP08226 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ApoeP08226 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.8□□□□□ -0.52
ApoeP08226 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ApoeP08226 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms