Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.24□□□□□ -0.29
TnfP06804 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.24□□□□□ -0.29
TnfP06804 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TnfP06804 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TnfP06804 Gm14028-201ENSMUST00000117434 479 ntBASIC13.24□□□□□ -0.29
TnfP06804 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.24□□□□□ -0.29
TnfP06804 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Gm8913-201ENSMUST00000209491 641 ntBASIC13.24□□□□□ -0.29
TnfP06804 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.24□□□□□ -0.29
TnfP06804 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.24□□□□□ -0.29
TnfP06804 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Gm8385-201ENSMUST00000058999 643 ntBASIC13.24□□□□□ -0.29
TnfP06804 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TnfP06804 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TnfP06804 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TnfP06804 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TnfP06804 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TnfP06804 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TnfP06804 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TnfP06804 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.23□□□□□ -0.29
TnfP06804 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Gm24934-201ENSMUST00000103764 111 ntBASIC13.23□□□□□ -0.29
TnfP06804 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.23□□□□□ -0.29
TnfP06804 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Gm9230-201ENSMUST00000188228 532 ntBASIC13.23□□□□□ -0.29
TnfP06804 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.23□□□□□ -0.29
TnfP06804 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.23□□□□□ -0.29
TnfP06804 Gm45598-202ENSMUST00000210719 986 ntBASIC13.23□□□□□ -0.29
TnfP06804 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.23□□□□□ -0.29
TnfP06804 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.23□□□□□ -0.29
TnfP06804 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TnfP06804 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TnfP06804 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TnfP06804 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TnfP06804 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TnfP06804 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.22□□□□□ -0.29
TnfP06804 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TnfP06804 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TnfP06804 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.22□□□□□ -0.29
TnfP06804 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.22□□□□□ -0.29
TnfP06804 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.22□□□□□ -0.29
TnfP06804 Gm26461-201ENSMUST00000175064 290 ntBASIC13.22□□□□□ -0.29
TnfP06804 Mir7070-201ENSMUST00000183657 86 ntBASIC13.22□□□□□ -0.29
TnfP06804 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Rps4l-202ENSMUST00000204242 789 ntBASIC13.22□□□□□ -0.29
TnfP06804 Gm19187-201ENSMUST00000206781 892 ntBASIC13.22□□□□□ -0.29
TnfP06804 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.22□□□□□ -0.29
TnfP06804 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.22□□□□□ -0.29
TnfP06804 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms